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Modeling Epidemics: Neural Network Based on Data and SIR-Model Full article

Journal Computational Mathematics and Mathematical Physics
ISSN: 0965-5425 , E-ISSN: 1555-6662
Output data Year: 2023, Volume: 63, Number: 10, Pages: 1929-1941 Pages count : 13 DOI: 10.1134/s096554252310007x
Tags epidemiology, time series, machine learning, deep learning, data processing, recurrent neural networks, fully connected neural networks, COVID-19, prediction, forcasting
Authors Krivorotko O.I. 1 , Zyatkov N.Yu. 1 , Kabanikhin S.I. 1
Affiliations
1 Sobolev Institute of Mathematics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia

Funding (1)

1 Министерство науки и высшего образования РФ
Mathematical Center in Akademgorodok
075-15-2019-1613, 075-15-2022-281

Abstract: Earlier, a method for constructing an initial approximation for solving the inverse problem of acoustics by a gradient method based on a convolutional neural network trained to predict the distribution of velocities in a medium from wave response was proposed [9]. It was shown that the neural network trained on responses from simple layered media can be successfully used for solving the inverse problem for a significantly more complex model. In this paper, we present algorithms for processing data about epidemics and an example of applying a neural network for modeling the propagation of COVID-19 in Novosibirsk region (Russia) based only on data. A neural network NN-COVID-19 that uses data about the epidemics is constructed. It is shown that this neural network predicts the propagation of COVID-19 for five days by an order of magnitude better than SEIR-HCD. When a new variant (Omicron) appeared, this neural network was able to predict (after retraining) the propagation of the epidemics more accurately. Note that the proposed neural network uses not only epidemiological data but also social ones (such as holidays, restrictive measures, etc.). The proposed approach makes it possible to refine mathematical models. A comparison of the curves constructed by SEIRHCD model and by the neural network shows that the plots of solutions of the direct problem almost coincide with the plots constructed by the neural network. This helps refine coefficients of the differential model.
Cite: Krivorotko O.I. , Zyatkov N.Y. , Kabanikhin S.I.
Modeling Epidemics: Neural Network Based on Data and SIR-Model
Computational Mathematics and Mathematical Physics. 2023. V.63. N10. P.1929-1941. DOI: 10.1134/s096554252310007x WOS Scopus РИНЦ OpenAlex
Original: Криворотько О.И. , Зятьков Н.Ю. , Кабанихин С.И.
Моделирование эпидемий: нейросеть на основе данных и SIR-модели
Журнал вычислительной математики и математической физики. 2023. Т.63. №10. С.1733-1746. DOI: 10.31857/S0044466923100095 РИНЦ OpenAlex
Dates:
Submitted: May 22, 2023
Accepted: Jun 26, 2023
Published print: Nov 20, 2023
Published online: Nov 20, 2023
Identifiers:
Web of science: WOS:001104729700015
Scopus: 2-s2.0-85176924309
Elibrary: 64074182
OpenAlex: W4388718768
Citing:
DB Citing
OpenAlex 4
Scopus 3
Web of science 2
Elibrary 5
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